On 13 Oct 2011, at 23:23, Martin Batholdy wrote:
I start the Rdaemon with CMD+enter and then execute selected lines with the "execute selection" menu item. A small window pops up with a progress bar and the message "sending task to Rdaemon". After this is finished the selection converts to R-output.
I don't have a separate R-window open.
The script is actually not that large. It is just about 200 lines of code (8kb on disk).
But since I get this strange parsing-behavior always at the end of the script, I thought it has something to do with that.
Hi Martin,
ok, I got it [Rdaemon offers flexible workflows ;) ]
The point is that the output of the R console which runs in the background will be parsed by a Perl script to clean the output since it could contain many control characters etc. I guess that's the problem.
Important: Which MacOSX and R version do you running?
and
Please do the following: - start a new Rdaemon session - execute your R code in question - go to the "R Console (Rdaemon)" menu > "Rdaemon Tools" > "Logfiles" > "Open console log file r_out" [short-cut ⌥⌘T] - a new window should appear showing the RAW output of the current R session's output [don't be confused ;)] - check the window's content for any confidential data and if you can send me the content please do this: -- open Finder; go to ~/Library/Application Support/Rdaemon; and send me the file "r_out" [please do not copy/save the content file to another file since editors can "destroy" its content due to possible control characters]
With this I can check the Perl script. Maybe I missed some output sequences to catch.
Best, --Hans